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Status of SARS-CoV-2 detection systems (RT-PCR)
enabled by data from GISAID logo


Update: Sun Oct 25 07:18:47 2020 (UTC+2)

Author: Olivier Friard - Department of Life Sciences and Systems Biology - University of Turin - Italy

We gratefully acknowledge the Authors of the Originating and Submitting laboratories of the genetic sequence and metadata shared via GISAID, on which this research is based.
The isolates collection dates are in YYYY-MM-DD format (ISO 8601).

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New Zealand

Number of isolates sequences available: 902

Method

When the target sequence of amplification systems is available the primers and probe are aligned against the target sequence using the Smith-Waterman local sequence alignment algorithm and the alignments are classified in 3 categories:
             Full match - All primers and probe have a 100% identity with the target sequence. In case of a 2 probes system (RdRP) at least one probe must have a 100% identity.
             The identities of forward/reverse primers AND probe are greater than or equal to 80% AND the length of the amplification product is comprised between the reference length plus/minus 8 bp.
             The identity of one primer OR the probe are less than 80% OR the length of the amplification product is NOT comprised between reference length plus/minus 8 bp.

If the target sequence is not available the The sequence is not available warning is shown.
Please note that the reverse primer sequence is shown reverted-complemented in the alignments.

Results

Move the mouse cursor over elements to see the details.

Virus name / Accession IDRegionCollection date2019-nCoV_N12019-nCoV_N22019-nCoV_N3E-SarbecoRdRP
EPI_ISL_483060
NewZealand/01/2020 EPI_ISL_413490Auckland2020-02-27
NewZealand/20VR0189/2020 EPI_ISL_416519Auckland2020-03-02
NewZealand/20VR0206/2020 EPI_ISL_416526Auckland2020-03-05
EPI_ISL_456157Auckland
EPI_ISL_456172Auckland
EPI_ISL_456173Auckland
EPI_ISL_456174Auckland
EPI_ISL_456175Auckland
EPI_ISL_456176Auckland
EPI_ISL_456177Auckland
EPI_ISL_456178Auckland
EPI_ISL_456179Auckland
EPI_ISL_456180Auckland
EPI_ISL_456196Auckland
EPI_ISL_456197Auckland
EPI_ISL_456198Auckland
EPI_ISL_456199Auckland
EPI_ISL_456200Auckland
EPI_ISL_456201Auckland
EPI_ISL_456202Auckland
EPI_ISL_456203Auckland
EPI_ISL_456204Auckland
EPI_ISL_456205Auckland
EPI_ISL_456206Auckland
EPI_ISL_456207Auckland
EPI_ISL_456208Auckland
EPI_ISL_456209Auckland
EPI_ISL_456210Auckland
EPI_ISL_456211Auckland
EPI_ISL_456212Auckland
EPI_ISL_456379Auckland
EPI_ISL_456380Auckland
EPI_ISL_456381Auckland
EPI_ISL_456382Auckland
EPI_ISL_456383Auckland
EPI_ISL_456384Auckland
EPI_ISL_456388Auckland
EPI_ISL_456389Auckland
EPI_ISL_456390Auckland
EPI_ISL_456391Auckland
EPI_ISL_456392Auckland
EPI_ISL_456393Auckland
EPI_ISL_456394Auckland
EPI_ISL_534335Auckland
EPI_ISL_547971Auckland
EPI_ISL_547991Auckland
EPI_ISL_547992Auckland
EPI_ISL_547996Auckland
EPI_ISL_547997Auckland
EPI_ISL_547998Auckland
EPI_ISL_548003Auckland
EPI_ISL_548008Auckland
EPI_ISL_548009Auckland
EPI_ISL_548010Auckland
EPI_ISL_548011Auckland
EPI_ISL_548012Auckland
EPI_ISL_548017Auckland
EPI_ISL_548018Auckland
EPI_ISL_548019Auckland
EPI_ISL_548020Auckland
EPI_ISL_548021Auckland
EPI_ISL_548022Auckland
EPI_ISL_548023Auckland
EPI_ISL_548024Auckland
EPI_ISL_548025Auckland
EPI_ISL_548026Auckland
EPI_ISL_548027Auckland
EPI_ISL_548028Auckland
EPI_ISL_548029Auckland
EPI_ISL_548030Auckland
EPI_ISL_548031Auckland
EPI_ISL_548032Auckland
EPI_ISL_548033Auckland
EPI_ISL_548034Auckland
EPI_ISL_548035Auckland
EPI_ISL_548036Auckland
EPI_ISL_548037Auckland
EPI_ISL_548038Auckland
EPI_ISL_548039Auckland
EPI_ISL_548040Auckland
EPI_ISL_548041Auckland
EPI_ISL_548042Auckland
EPI_ISL_548043Auckland
EPI_ISL_548044Auckland
EPI_ISL_548045Auckland
EPI_ISL_548047Auckland
EPI_ISL_548048Auckland
EPI_ISL_548049Auckland
EPI_ISL_548050Auckland
EPI_ISL_548051Auckland
EPI_ISL_548052Auckland
EPI_ISL_548053Auckland
EPI_ISL_548054Auckland
EPI_ISL_548055Auckland
EPI_ISL_548056Auckland
EPI_ISL_548057Auckland
EPI_ISL_548058Auckland
EPI_ISL_548059Auckland
EPI_ISL_548060Auckland
EPI_ISL_548061Auckland
EPI_ISL_548062Auckland
EPI_ISL_548063Auckland
EPI_ISL_548065Auckland
EPI_ISL_548066Auckland
EPI_ISL_548067Auckland
EPI_ISL_548068Auckland
EPI_ISL_548069Auckland
EPI_ISL_548070Auckland
EPI_ISL_548071Auckland
EPI_ISL_548072Auckland
EPI_ISL_548073Auckland
EPI_ISL_548074Auckland
EPI_ISL_548075Auckland
EPI_ISL_548076Auckland
EPI_ISL_548077Auckland
EPI_ISL_548078Auckland
EPI_ISL_548079Auckland
EPI_ISL_548080Auckland
EPI_ISL_548081Auckland
EPI_ISL_548082Auckland
EPI_ISL_548083Auckland
EPI_ISL_548084Auckland
EPI_ISL_548085Auckland
EPI_ISL_548086Auckland
EPI_ISL_548087Auckland
EPI_ISL_548088Auckland
EPI_ISL_548089Auckland
EPI_ISL_548090Auckland
EPI_ISL_548091Auckland
EPI_ISL_548092Auckland
EPI_ISL_548093Auckland
EPI_ISL_548094Auckland
EPI_ISL_548095Auckland
EPI_ISL_548096Auckland
EPI_ISL_548097Auckland
EPI_ISL_548098Auckland
EPI_ISL_548099Auckland
EPI_ISL_548100Auckland
EPI_ISL_548103Auckland
EPI_ISL_548107Auckland
EPI_ISL_548108Auckland
EPI_ISL_548109Auckland
EPI_ISL_548110Auckland
EPI_ISL_548111Auckland
EPI_ISL_548112Auckland
EPI_ISL_548113Auckland
EPI_ISL_548114Auckland
EPI_ISL_548115Auckland
EPI_ISL_548119Auckland
EPI_ISL_548120Auckland
EPI_ISL_548121Auckland
EPI_ISL_548122Auckland
EPI_ISL_548123Auckland
EPI_ISL_548124Auckland
EPI_ISL_548125Auckland
EPI_ISL_548126Auckland
EPI_ISL_548127Auckland
EPI_ISL_548128Auckland
EPI_ISL_548130Auckland
EPI_ISL_548131Auckland
EPI_ISL_548132Auckland
EPI_ISL_548133Auckland
EPI_ISL_548135Auckland
EPI_ISL_548136Auckland
EPI_ISL_548137Auckland
EPI_ISL_548141Auckland
EPI_ISL_548142Auckland
EPI_ISL_548143Auckland
EPI_ISL_548144Auckland
EPI_ISL_548145Auckland
EPI_ISL_548146Auckland
EPI_ISL_579059Auckland
EPI_ISL_579074Auckland
EPI_ISL_579082Auckland
EPI_ISL_579083Auckland
EPI_ISL_579084Auckland
EPI_ISL_579085Auckland
EPI_ISL_579086Auckland
EPI_ISL_579093Auckland
EPI_ISL_579094Auckland
EPI_ISL_579095Auckland
EPI_ISL_579097Auckland
EPI_ISL_579098Auckland
EPI_ISL_579107Auckland
EPI_ISL_579108Auckland
EPI_ISL_579109Auckland
EPI_ISL_579110Auckland
EPI_ISL_579111Auckland
EPI_ISL_579112Auckland
EPI_ISL_579113Auckland
EPI_ISL_579114Auckland
EPI_ISL_579115Auckland
EPI_ISL_579116Auckland
EPI_ISL_579117Auckland
EPI_ISL_579119Auckland
EPI_ISL_579120Auckland
EPI_ISL_579122Auckland
EPI_ISL_579123Auckland
EPI_ISL_579156Auckland
EPI_ISL_579233Auckland
EPI_ISL_579234Auckland
EPI_ISL_579235Auckland
EPI_ISL_579236Auckland
EPI_ISL_579237Auckland
EPI_ISL_579238Auckland
EPI_ISL_579239Auckland
EPI_ISL_579240Auckland
EPI_ISL_579241Auckland
EPI_ISL_579242Auckland
EPI_ISL_579243Auckland
EPI_ISL_579244Auckland
EPI_ISL_579245Auckland
EPI_ISL_579246Auckland
EPI_ISL_579247Auckland
EPI_ISL_579248Auckland
EPI_ISL_579249Auckland
EPI_ISL_579250Auckland
EPI_ISL_579251Auckland
EPI_ISL_579252Auckland
EPI_ISL_579253Auckland
EPI_ISL_579254Auckland
EPI_ISL_579255Auckland
EPI_ISL_579256Auckland
EPI_ISL_579257AucklandThe sequence is not availableThe sequence is not availableThe sequence is not available
EPI_ISL_579258Auckland
EPI_ISL_579259Auckland
EPI_ISL_579260Auckland
EPI_ISL_579261Auckland
EPI_ISL_579262Auckland
EPI_ISL_579263Auckland
EPI_ISL_579264Auckland
EPI_ISL_579265Auckland
EPI_ISL_579266Auckland
EPI_ISL_579267Auckland
EPI_ISL_579268Auckland
EPI_ISL_579269Auckland
EPI_ISL_579270Auckland
EPI_ISL_579271Auckland
EPI_ISL_579272Auckland
EPI_ISL_579273Auckland
EPI_ISL_579274Auckland
EPI_ISL_579275AucklandThe sequence is not availableThe sequence is not availableThe sequence is not available
EPI_ISL_579276Auckland
EPI_ISL_579277Auckland
EPI_ISL_579278Auckland
EPI_ISL_579279Auckland
EPI_ISL_579280Auckland
EPI_ISL_579281Auckland
EPI_ISL_579282Auckland
EPI_ISL_579283Auckland
EPI_ISL_579284Auckland
EPI_ISL_579285Auckland
EPI_ISL_579286Auckland
EPI_ISL_579287Auckland
EPI_ISL_579288Auckland
EPI_ISL_579289Auckland
EPI_ISL_579290Auckland
EPI_ISL_579291Auckland
EPI_ISL_579292Auckland
EPI_ISL_579293Auckland
EPI_ISL_579315Auckland
EPI_ISL_579316Auckland
EPI_ISL_579317Auckland
EPI_ISL_579318Auckland
EPI_ISL_579319Auckland
EPI_ISL_579320Auckland
EPI_ISL_579321Auckland
EPI_ISL_579322Auckland
EPI_ISL_579323Auckland
EPI_ISL_579324Auckland
EPI_ISL_579325Auckland
EPI_ISL_579326Auckland
EPI_ISL_579327Auckland
EPI_ISL_579328Auckland
EPI_ISL_579329Auckland
EPI_ISL_579330Auckland
EPI_ISL_579331Auckland
EPI_ISL_579332Auckland
EPI_ISL_579333Auckland
EPI_ISL_579334Auckland
EPI_ISL_579335Auckland
EPI_ISL_579336Auckland
EPI_ISL_579337Auckland
EPI_ISL_579338Auckland
EPI_ISL_579339Auckland
EPI_ISL_579340Auckland
EPI_ISL_579341Auckland
EPI_ISL_579342Auckland
EPI_ISL_579343Auckland
EPI_ISL_579344Auckland
EPI_ISL_579345Auckland
EPI_ISL_579346Auckland
EPI_ISL_579347Auckland
EPI_ISL_579348Auckland
EPI_ISL_579349Auckland
EPI_ISL_579350Auckland
EPI_ISL_579351Auckland
EPI_ISL_579352Auckland
EPI_ISL_579353Auckland
EPI_ISL_579354Auckland
EPI_ISL_579355Auckland
EPI_ISL_579356Auckland
EPI_ISL_579357Auckland
EPI_ISL_579358Auckland
EPI_ISL_579359Auckland
EPI_ISL_579360Auckland
EPI_ISL_579361Auckland
EPI_ISL_579362Auckland
EPI_ISL_579363Auckland
EPI_ISL_579364Auckland
EPI_ISL_579365Auckland
EPI_ISL_579366Auckland
EPI_ISL_579367Auckland
EPI_ISL_579368Auckland
EPI_ISL_579369Auckland
EPI_ISL_579370Auckland
EPI_ISL_579371Auckland
EPI_ISL_579372Auckland
EPI_ISL_579373Auckland
EPI_ISL_579374Auckland
EPI_ISL_579375Auckland
EPI_ISL_579376Auckland
EPI_ISL_579377Auckland
EPI_ISL_579378Auckland
EPI_ISL_579403Auckland
EPI_ISL_579405Auckland
EPI_ISL_579415Auckland
EPI_ISL_579416Auckland
EPI_ISL_579417Auckland
EPI_ISL_579425Auckland
EPI_ISL_579514Auckland
EPI_ISL_582017Auckland
EPI_ISL_582022Auckland
EPI_ISL_582023Auckland
EPI_ISL_456171Bay of Plenty
EPI_ISL_456194Bay of Plenty
EPI_ISL_456195Bay of Plenty
EPI_ISL_456215Bay of Plenty
EPI_ISL_456221Bay of Plenty
EPI_ISL_456222Bay of Plenty
EPI_ISL_456223Bay of Plenty
EPI_ISL_456224Bay of Plenty
EPI_ISL_582018Bay of Plenty
EPI_ISL_582019Bay of Plenty
EPI_ISL_582020Bay of Plenty
EPI_ISL_582021Bay of Plenty
EPI_ISL_456230Canterbury
EPI_ISL_456246Canterbury
EPI_ISL_456321Canterbury
EPI_ISL_456322Canterbury
EPI_ISL_456348Canterbury
EPI_ISL_456349Canterbury
EPI_ISL_456350Canterbury
EPI_ISL_456351Canterbury
EPI_ISL_456352Canterbury
EPI_ISL_456353Canterbury
EPI_ISL_456354Canterbury
EPI_ISL_456355Canterbury
EPI_ISL_456356Canterbury
EPI_ISL_456357Canterbury
EPI_ISL_456358Canterbury
EPI_ISL_456359Canterbury
EPI_ISL_456360Canterbury
EPI_ISL_456361Canterbury
EPI_ISL_456362Canterbury
EPI_ISL_456363Canterbury
EPI_ISL_456364Canterbury
EPI_ISL_456365Canterbury
EPI_ISL_456366Canterbury
EPI_ISL_456367Canterbury
EPI_ISL_456368Canterbury
EPI_ISL_456369Canterbury
EPI_ISL_456370Canterbury
EPI_ISL_456371Canterbury
EPI_ISL_456372Canterbury
EPI_ISL_456373Canterbury
EPI_ISL_456374Canterbury
EPI_ISL_456375Canterbury
EPI_ISL_547985Canterbury
EPI_ISL_548116Canterbury
EPI_ISL_548117Canterbury
EPI_ISL_548118Canterbury
EPI_ISL_548129Canterbury
EPI_ISL_548134Canterbury
EPI_ISL_548138Canterbury
EPI_ISL_548139Canterbury
EPI_ISL_548140Canterbury
EPI_ISL_579061Canterbury
EPI_ISL_579065Canterbury
EPI_ISL_579070Canterbury
EPI_ISL_579073Canterbury
EPI_ISL_579078Canterbury
EPI_ISL_579079Canterbury
EPI_ISL_579080Canterbury
EPI_ISL_579081Canterbury
EPI_ISL_579092Canterbury
EPI_ISL_579105Canterbury
EPI_ISL_579106Canterbury
EPI_ISL_579220Canterbury
EPI_ISL_579221Canterbury
EPI_ISL_579222Canterbury
EPI_ISL_579223Canterbury
EPI_ISL_579224Canterbury
EPI_ISL_579225Canterbury
EPI_ISL_579226Canterbury
EPI_ISL_579227Canterbury
EPI_ISL_579408Canterbury
EPI_ISL_579409Canterbury
EPI_ISL_579410Canterbury
EPI_ISL_579411Canterbury
EPI_ISL_579412Canterbury
EPI_ISL_579413Canterbury
EPI_ISL_579414Canterbury
EPI_ISL_579426Canterbury
EPI_ISL_579427Canterbury
EPI_ISL_579428Canterbury
EPI_ISL_579429Canterbury
EPI_ISL_579430Canterbury
EPI_ISL_579431Canterbury
EPI_ISL_579432Canterbury
EPI_ISL_579433Canterbury
EPI_ISL_579434Canterbury
EPI_ISL_579435Canterbury
EPI_ISL_579436Canterbury
EPI_ISL_579437Canterbury
EPI_ISL_579438Canterbury
EPI_ISL_579439Canterbury
EPI_ISL_579440Canterbury
EPI_ISL_579441Canterbury
EPI_ISL_579442Canterbury
EPI_ISL_579443Canterbury
EPI_ISL_579444Canterbury
EPI_ISL_579445Canterbury
EPI_ISL_579446Canterbury
EPI_ISL_579447Canterbury
EPI_ISL_579448Canterbury
EPI_ISL_579449Canterbury
EPI_ISL_579450Canterbury
EPI_ISL_579451Canterbury
EPI_ISL_579452Canterbury
EPI_ISL_579453Canterbury
EPI_ISL_579454Canterbury
EPI_ISL_579455Canterbury
EPI_ISL_579456Canterbury
EPI_ISL_579457Canterbury
EPI_ISL_579458Canterbury
EPI_ISL_579459Canterbury
EPI_ISL_579460Canterbury
EPI_ISL_579461Canterbury
EPI_ISL_579462Canterbury
EPI_ISL_579463Canterbury
EPI_ISL_579464Canterbury
EPI_ISL_579465Canterbury
EPI_ISL_579466Canterbury
EPI_ISL_579467Canterbury
EPI_ISL_579468Canterbury
EPI_ISL_579469Canterbury
EPI_ISL_579470Canterbury
EPI_ISL_579471Canterbury
EPI_ISL_579473Canterbury
EPI_ISL_579474Canterbury
EPI_ISL_579475Canterbury
EPI_ISL_579476Canterbury
EPI_ISL_579477Canterbury
EPI_ISL_579478Canterbury
EPI_ISL_579479Canterbury
EPI_ISL_579480Canterbury
EPI_ISL_579481Canterbury
EPI_ISL_579482Canterbury
EPI_ISL_579483Canterbury
EPI_ISL_579484Canterbury
EPI_ISL_579485Canterbury
EPI_ISL_579486Canterbury
EPI_ISL_579487Canterbury
EPI_ISL_579488Canterbury
EPI_ISL_579489Canterbury
EPI_ISL_579490Canterbury
EPI_ISL_579491Canterbury
EPI_ISL_579492Canterbury
EPI_ISL_579493Canterbury
EPI_ISL_579494Canterbury
EPI_ISL_579495Canterbury
EPI_ISL_579496Canterbury
EPI_ISL_579497Canterbury
EPI_ISL_579498Canterbury
EPI_ISL_579499Canterbury
EPI_ISL_579500Canterbury
EPI_ISL_579501Canterbury
EPI_ISL_579502Canterbury
EPI_ISL_579503Canterbury
EPI_ISL_579504Canterbury
EPI_ISL_579505Canterbury
EPI_ISL_579506Canterbury
EPI_ISL_579190Capital and Coast
EPI_ISL_579191Capital and Coast
EPI_ISL_547969Combined Auckland
EPI_ISL_547970Combined Auckland
EPI_ISL_547972Combined Auckland
EPI_ISL_547973Combined Auckland
EPI_ISL_547974Combined Auckland
EPI_ISL_547975Combined Auckland
EPI_ISL_547976Combined Auckland
EPI_ISL_547977Combined Auckland
EPI_ISL_547978Combined Auckland
EPI_ISL_547979Combined Auckland
EPI_ISL_547980Combined Auckland
EPI_ISL_547981Combined Auckland
EPI_ISL_547982Combined Auckland
EPI_ISL_547983Combined Auckland
EPI_ISL_547984Combined Auckland
EPI_ISL_547986Combined Auckland
EPI_ISL_547987Combined Auckland
EPI_ISL_547988Combined Auckland
EPI_ISL_547989Combined Auckland
EPI_ISL_547990Combined Auckland
EPI_ISL_547993Combined Auckland
EPI_ISL_547994Combined Auckland
EPI_ISL_547995Combined Auckland
EPI_ISL_547999Combined Auckland
EPI_ISL_548000Combined Auckland
EPI_ISL_548001Combined Auckland
EPI_ISL_548002Combined Auckland
EPI_ISL_548004Combined Auckland
EPI_ISL_548005Combined Auckland
EPI_ISL_548006Combined Auckland
EPI_ISL_548007Combined Auckland
EPI_ISL_548013Combined Auckland
EPI_ISL_548014Combined Auckland
EPI_ISL_548015Combined Auckland
EPI_ISL_548016Combined Auckland
EPI_ISL_548046Combined Auckland
EPI_ISL_548104Combined Auckland
EPI_ISL_548105Combined Auckland
EPI_ISL_548106Combined Auckland
EPI_ISL_579058Combined Auckland
EPI_ISL_579099Combined Auckland
EPI_ISL_579421Combined Auckland
EPI_ISL_579422Combined Auckland
EPI_ISL_579423Combined Auckland
EPI_ISL_579424Combined Auckland
EPI_ISL_456161Combined Wellington
EPI_ISL_456164Combined Wellington
EPI_ISL_456165Combined Wellington
EPI_ISL_456166Combined Wellington
EPI_ISL_456182Combined Wellington
EPI_ISL_456183Combined Wellington
EPI_ISL_456184Combined Wellington
EPI_ISL_456185Combined Wellington
EPI_ISL_456186Combined Wellington
EPI_ISL_456319Combined Wellington
EPI_ISL_456320Combined Wellington
EPI_ISL_456324Combined Wellington
EPI_ISL_456325Combined Wellington
EPI_ISL_456326Combined Wellington
EPI_ISL_456327Combined Wellington
EPI_ISL_456328Combined Wellington
EPI_ISL_456329Combined Wellington
EPI_ISL_456330Combined Wellington
EPI_ISL_456331Combined Wellington
EPI_ISL_456332Combined Wellington
EPI_ISL_456333Combined Wellington
EPI_ISL_456334Combined Wellington
EPI_ISL_456335Combined Wellington
EPI_ISL_456336Combined Wellington
EPI_ISL_456337Combined Wellington
EPI_ISL_456338Combined Wellington
EPI_ISL_456339Combined Wellington
EPI_ISL_456340Combined Wellington
EPI_ISL_456341Combined Wellington
EPI_ISL_456342Combined Wellington
EPI_ISL_456343Combined Wellington
EPI_ISL_456398Combined Wellington
EPI_ISL_456399Combined Wellington
EPI_ISL_456400Combined Wellington
EPI_ISL_456401Combined Wellington
EPI_ISL_456402Combined Wellington
EPI_ISL_579192Combined Wellington
EPI_ISL_579193Combined Wellington
EPI_ISL_579194Combined Wellington
EPI_ISL_579195Combined Wellington
EPI_ISL_579196Combined Wellington
EPI_ISL_579197Combined Wellington
EPI_ISL_579198Combined Wellington
EPI_ISL_579199Combined Wellington
EPI_ISL_579200Combined Wellington
EPI_ISL_579201Combined Wellington
EPI_ISL_579202Combined Wellington
EPI_ISL_579203Combined Wellington
EPI_ISL_579204Combined Wellington
EPI_ISL_579205Combined Wellington
EPI_ISL_579206Combined Wellington
EPI_ISL_579207Combined Wellington
EPI_ISL_579208Combined Wellington
EPI_ISL_579209Combined Wellington
EPI_ISL_579210Combined Wellington
EPI_ISL_579211Combined Wellington
EPI_ISL_579212Combined Wellington
EPI_ISL_579213Combined Wellington
EPI_ISL_579214Combined Wellington
EPI_ISL_579215Combined Wellington
EPI_ISL_579216Combined Wellington
EPI_ISL_579217Combined Wellington
EPI_ISL_579218Combined Wellington
EPI_ISL_579379Combined Wellington
EPI_ISL_579380Combined Wellington
EPI_ISL_579381Combined Wellington
EPI_ISL_579382Combined Wellington
EPI_ISL_579383Combined Wellington
EPI_ISL_579384Combined Wellington
EPI_ISL_579385Combined Wellington
EPI_ISL_579386Combined Wellington
EPI_ISL_579387Combined Wellington
EPI_ISL_579388Combined Wellington
EPI_ISL_579389Combined Wellington
EPI_ISL_579390Combined Wellington
EPI_ISL_579391Combined Wellington
EPI_ISL_579392Combined Wellington
EPI_ISL_579393Combined Wellington
EPI_ISL_579394Combined Wellington
EPI_ISL_579395Combined Wellington
EPI_ISL_579396Combined Wellington
EPI_ISL_579397Combined Wellington
EPI_ISL_579398Combined Wellington
EPI_ISL_579399Combined Wellington
EPI_ISL_579400Combined Wellington
EPI_ISL_579401Combined Wellington
EPI_ISL_579402Combined Wellington
EPI_ISL_579406Combined Wellington
EPI_ISL_579507Combined Wellington
EPI_ISL_579508Combined Wellington
EPI_ISL_579509Combined Wellington
EPI_ISL_579510Combined Wellington
EPI_ISL_579511Combined Wellington
EPI_ISL_579512Combined Wellington
EPI_ISL_579513Combined Wellington
EPI_ISL_456213Counties Manukau
EPI_ISL_456214Counties Manukau
EPI_ISL_456255Counties Manukau
EPI_ISL_456256Counties Manukau
EPI_ISL_456257Counties Manukau
EPI_ISL_456258Counties Manukau
EPI_ISL_456376Counties Manukau
EPI_ISL_456385Counties Manukau
EPI_ISL_456386Counties Manukau
EPI_ISL_456387Counties Manukau
EPI_ISL_456403Counties Manukau
EPI_ISL_579100Counties Manukau
EPI_ISL_579101Counties Manukau
EPI_ISL_579102Counties Manukau
EPI_ISL_579103Counties Manukau
EPI_ISL_579104Counties Manukau
EPI_ISL_579129Counties Manukau
EPI_ISL_579130Counties Manukau
EPI_ISL_579131Counties Manukau
EPI_ISL_579132Counties Manukau
EPI_ISL_579228Counties Manukau
EPI_ISL_579229Counties Manukau
EPI_ISL_579230Counties Manukau
EPI_ISL_579231Counties Manukau
EPI_ISL_579232Counties Manukau
EPI_ISL_579294Counties Manukau
EPI_ISL_579295Counties Manukau
EPI_ISL_579296Counties Manukau
EPI_ISL_579297Counties Manukau
EPI_ISL_579298Counties Manukau
EPI_ISL_579299Counties Manukau
EPI_ISL_579300Counties Manukau
EPI_ISL_579301Counties Manukau
EPI_ISL_579302Counties Manukau
EPI_ISL_579303Counties Manukau
EPI_ISL_579304Counties Manukau
EPI_ISL_579305Counties Manukau
EPI_ISL_579306Counties Manukau
EPI_ISL_579307Counties Manukau
EPI_ISL_579308Counties Manukau
EPI_ISL_579309Counties Manukau
EPI_ISL_579310Counties Manukau
EPI_ISL_579311Counties Manukau
EPI_ISL_579312Counties Manukau
EPI_ISL_579313Counties Manukau
EPI_ISL_579314Counties Manukau
EPI_ISL_579404Counties Manukau
EPI_ISL_579063Hawkes Bay
EPI_ISL_579064Hawkes Bay
EPI_ISL_579067Hawkes Bay
EPI_ISL_579068Hawkes Bay
EPI_ISL_579069Hawkes Bay
EPI_ISL_579071Hawkes Bay
EPI_ISL_579087Hawkes Bay
EPI_ISL_579088Hawkes Bay
EPI_ISL_579089Hawkes Bay
EPI_ISL_579091Hawkes Bay
EPI_ISL_579418Hutt Valley
EPI_ISL_579419Hutt Valley
EPI_ISL_579420Hutt Valley
EPI_ISL_456163Lakes
EPI_ISL_456377MidCentral
EPI_ISL_456378MidCentral
EPI_ISL_536792MidCentral
EPI_ISL_579090MidCentral
EPI_ISL_456238Nelson Marlborough
EPI_ISL_579066Nelson Marlborough
NewZealand/CoV001/2020 EPI_ISL_417211Otago2020-03-11
NewZealand/CoV002/2020 EPI_ISL_417212Otago2020-03-11
EPI_ISL_456158Southern
EPI_ISL_456159Southern
EPI_ISL_456162Southern
EPI_ISL_456167Southern
EPI_ISL_456181Southern
EPI_ISL_456216Southern
EPI_ISL_456217Southern
EPI_ISL_456218Southern
EPI_ISL_456219Southern
EPI_ISL_456220Southern
EPI_ISL_456225Southern
EPI_ISL_456226Southern
EPI_ISL_456227Southern
EPI_ISL_456228Southern
EPI_ISL_456229Southern
EPI_ISL_456231Southern
EPI_ISL_456232Southern
EPI_ISL_456233Southern
EPI_ISL_456234Southern
EPI_ISL_456235Southern
EPI_ISL_456236Southern
EPI_ISL_456237Southern
EPI_ISL_456239Southern
EPI_ISL_456240Southern
EPI_ISL_456242Southern
EPI_ISL_456243Southern
EPI_ISL_456244Southern
EPI_ISL_456245Southern
EPI_ISL_456247Southern
EPI_ISL_456248Southern
EPI_ISL_456249Southern
EPI_ISL_456250Southern
EPI_ISL_456251Southern
EPI_ISL_456252Southern
EPI_ISL_456253Southern
EPI_ISL_456254Southern
EPI_ISL_456261Southern
EPI_ISL_456262Southern
EPI_ISL_456263Southern
EPI_ISL_456264Southern
EPI_ISL_456265Southern
EPI_ISL_456266Southern
EPI_ISL_456267Southern
EPI_ISL_456268Southern
EPI_ISL_456269Southern
EPI_ISL_456270Southern
EPI_ISL_456271Southern
EPI_ISL_456272Southern
EPI_ISL_456273Southern
EPI_ISL_456274Southern
EPI_ISL_456275Southern
EPI_ISL_456276Southern
EPI_ISL_456277Southern
EPI_ISL_456278Southern
EPI_ISL_456279Southern
EPI_ISL_456280Southern
EPI_ISL_456281Southern
EPI_ISL_456282Southern
EPI_ISL_456283Southern
EPI_ISL_456284Southern
EPI_ISL_456285Southern
EPI_ISL_456286Southern
EPI_ISL_456287Southern
EPI_ISL_456288Southern
EPI_ISL_456289Southern
EPI_ISL_456290Southern
EPI_ISL_456291Southern
EPI_ISL_456292Southern
EPI_ISL_456293Southern
EPI_ISL_456295Southern
EPI_ISL_456296Southern
EPI_ISL_456297Southern
EPI_ISL_456298Southern
EPI_ISL_456299Southern
EPI_ISL_456302Southern
EPI_ISL_456303Southern
EPI_ISL_456304Southern
EPI_ISL_456305Southern
EPI_ISL_456306Southern
EPI_ISL_456307Southern
EPI_ISL_456308Southern
EPI_ISL_456309Southern
EPI_ISL_456310Southern
EPI_ISL_456311Southern
EPI_ISL_456312Southern
EPI_ISL_456313Southern
EPI_ISL_456314Southern
EPI_ISL_456315Southern
EPI_ISL_456316Southern
EPI_ISL_456317Southern
EPI_ISL_456318Southern
EPI_ISL_456344Southern
EPI_ISL_456345Southern
EPI_ISL_456346Southern
EPI_ISL_456347Southern
EPI_ISL_536788Southern
EPI_ISL_536789Southern
EPI_ISL_579124Southern
EPI_ISL_579125Southern
EPI_ISL_579126Southern
EPI_ISL_579127Southern
EPI_ISL_579128Southern
EPI_ISL_579133Southern
EPI_ISL_579134Southern
EPI_ISL_579135Southern
EPI_ISL_579136Southern
EPI_ISL_579137SouthernThe sequence is not availableThe sequence is not availableThe sequence is not available
EPI_ISL_579138Southern
EPI_ISL_579139Southern
EPI_ISL_579140Southern
EPI_ISL_579141Southern
EPI_ISL_579142Southern
EPI_ISL_579143Southern
EPI_ISL_579144Southern
EPI_ISL_579145Southern
EPI_ISL_579146Southern
EPI_ISL_579147Southern
EPI_ISL_579148Southern
EPI_ISL_579149Southern
EPI_ISL_579150Southern
EPI_ISL_579151Southern
EPI_ISL_579152Southern
EPI_ISL_579153Southern
EPI_ISL_579154Southern
EPI_ISL_579155Southern
EPI_ISL_579157Southern
EPI_ISL_579158Southern
EPI_ISL_579159Southern
EPI_ISL_579160Southern
EPI_ISL_579161Southern
EPI_ISL_579162Southern
EPI_ISL_579163Southern
EPI_ISL_579164Southern
EPI_ISL_579165Southern
EPI_ISL_579166Southern
EPI_ISL_579167Southern
EPI_ISL_579168Southern
EPI_ISL_579169Southern
EPI_ISL_579170Southern
EPI_ISL_579171Southern
EPI_ISL_579172Southern
EPI_ISL_579173Southern
EPI_ISL_579174Southern
EPI_ISL_579175Southern
EPI_ISL_579176Southern
EPI_ISL_579177Southern
EPI_ISL_579178Southern
EPI_ISL_579179Southern
EPI_ISL_579180Southern
EPI_ISL_579181Southern
EPI_ISL_579182Southern
EPI_ISL_579183Southern
EPI_ISL_579184Southern
EPI_ISL_579185Southern
EPI_ISL_579186Southern
EPI_ISL_579187Southern
EPI_ISL_579188Southern
EPI_ISL_579189Southern
EPI_ISL_579219Southern
EPI_ISL_579060Taranaki
EPI_ISL_579062Taranaki
EPI_ISL_579072Taranaki
EPI_ISL_579075Taranaki
EPI_ISL_579076Taranaki
EPI_ISL_579077Taranaki
EPI_ISL_456160Waikato
EPI_ISL_456168Waikato
EPI_ISL_456189Waikato
EPI_ISL_456190Waikato
EPI_ISL_456191Waikato
EPI_ISL_456192Waikato
EPI_ISL_456193Waikato
EPI_ISL_456241Waikato
EPI_ISL_456259Waikato
EPI_ISL_456260Waikato
EPI_ISL_456300Waikato
EPI_ISL_456301Waikato
EPI_ISL_536790Waikato
EPI_ISL_536791Waikato
EPI_ISL_548064Waikato
EPI_ISL_548101Waikato
EPI_ISL_548102Waikato
EPI_ISL_579118Waikato
EPI_ISL_579121Waikato
EPI_ISL_456169Wairarapa
EPI_ISL_456170Wairarapa
EPI_ISL_456187Wairarapa
EPI_ISL_456188Wairarapa
EPI_ISL_456294Waitemata
EPI_ISL_456323Waitemata
EPI_ISL_456395Waitemata
EPI_ISL_456396Waitemata
EPI_ISL_456397Waitemata
EPI_ISL_579096Waitemata
EPI_ISL_579407Waitemata
NewZealand/20VR0275/2020 EPI_ISL_416538Wellington2020-03-15
NewZealand/20VR0276/2020 EPI_ISL_416539Wellington2020-03-15

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